sordario_pairwise_diamond — NovInvenio reports

Lineage-specific gene analysis · one folder, three interactive reports

Reports

Each page is self-contained — open it directly, no network needed.

Novelty candidateslineage-specific genes27,008 rows Core genesnear-universally conserved4,984 rows Candidate gene lossesconserved in outgroup, lost in ingroup122 rows

Run summary

Reconstructed from the data embedded in the reports in this folder — no config CSV or pipeline rerun needed.

Ingroup proteomes
4
Outgroup proteomes
8
Ingroup min fraction
0.75
Outgroup min fraction
0.75
Loss ingroup max fraction
0
Core min fraction
0.95

Ingroup (4)

Genes are called lineage-specific relative to this clade.

ShortSpeciesTaxon group
AfumAspergillus fumigatus Af293Eurotiomycete
CimmCoccidioides immitis WA_211Eurotiomycete
FgraPH1Fusarium graminearum PH-1Sordariomycete
NcraNeurospora crassa OR74ASordariomycete

Outgroup (8)

Background proteomes used to exclude broadly conserved genes.

ShortSpeciesTaxon group
CcinCoprinus cinerea okyama 7-130Basidiomycota
CneoH99Cryptococcus neoformans H99Basidiomycota
McirMucor circinelloides 1006PhLMucoromycotina
NirrNeolecta irregularis DAH-3Taphrinomycotina
ScerSaccharomyces cerevisiae S288cSaccharomycotina
SpomSchizosaccharomyces pombe 972hTaphrinomycotina
YlipYarrowia lipolytica CLIB122Saccharomycotina
ZtriZymoseptoria triticiDothideomycete